Temporal Data Leakage Inflates Machine Learning Performance in Compostable PBAT/PLA Polymer Biodegradation Modeling
Juntong Zhang, Suwan Chen, Ziyi Li, Fang Xu, Yunxuan Weng, Guanyi Hou, Jun LiuAbstract
This study quantifies how evaluation protocol choice, not model architecture, governs apparent machine learning (ML) performance in poly(butylene adipate-co-terephthalate)/polylactic acid (PBAT/PLA) composite biodegradation modeling. Seven regression architectures spanning linear, regularized, kernel-based, ensemble, and Bayesian nonparametric methods were assessed under four protocols: random splitting, temporal holdout, leave-one-condition-out cross-validation, and temporal shuffle. Under random 80/20 splitting, all seven methods converge to R2 ≥ 0.95; a day-permutation diagnostic reveals that up to ∼96% of this apparent performance (ΔR2 = –0.959) reflects temporal adjacency exploitation, not learned degradation kinetics; this interpretation is confirmed by the immunity of a mechanistic exponential decay reference model (R2 = 0.985, unchanged after permutation). Under temporal holdout, a zero-parameter persistence predictor (R2 = +0.95) outperforms all ML methods (best R2 = +0.16); counterfactual validation across four test windows establishes this advantage as phase-conditional. Variance inflation factor (VIF) analysis reveals that environmental feature contributions cannot be independently estimated under the three-condition experimental design (VIF = ∞; rank-deficient matrix). A six-item diagnostic toolkit applicable to existing datasets without additional experiments is proposed. Evaluation protocol reform, not algorithmic innovation, constitutes the more urgent priority for reliable polymer biodegradation prediction.