Impact of Packaging Material on Polyphenol Preservation and Environmental Sustainability in Fresh-Cut Apples

Background: Fresh-cut apples are highly susceptible to quality deterioration due to enzymatic browning and oxidative degradation of bioactive compounds. This study investigated the effects of conventional polyethylene packaging (PE, Pack 1) and two innovative biodegradable packaging materials (Pack 2 and Pack 3) on the stability of bioactive compounds in fresh-cut Golden Delicious apples during refrigerated storage. Individual phenolic compounds ((+)-catechin, caffeic acid, (−)-epicatechin, p-coumaric acid, rutin, and quercetin) were quantified by HPLC-PDA, while spectrophotometric assays were used to determine total phenolic content (TPC), total flavonoid content (TFC), and antioxidant capacity (ABTS and DPPH). The environmental performance of the packaging materials was assessed through Life Cycle Assessment (LCA) using SimaPro v.9.5.5. Results: Polyphenol stability was significantly influenced by packaging and storage time (p < 0.001). Compared with fresh-cut apples at t0, Pack 2 promoted a 17.4% increase in total phenolic content after 21 days, whereas Pack 1 and Pack 3 showed reductions of 31.0% and 37.6%, respectively. HPLC analysis revealed compound-specific responses, with rutin and quercetin being markedly better preserved in Pack 3 after 21 days (17.65 and 1.93 mg/100 g, respectively) than in Pack 1 (0.67 and 0.19 mg/100 g, respectively). Two-way ANOVA confirmed significant effects of storage time, packaging, and their interaction on TPC, TFC, ABTS activity, and all individual phenolic compounds (p < 0.001), whereas DPPH activity was not significantly affected (p > 0.05). Pearson correlation (TPC–ABTS, r = 0.6885, p < 0.001) and principal component analysis indicated that antioxidant capacity was more closely associated with the qualitative phenolic profile than with total phenolic concentration alone. LCA highlighted environmental trade-offs among the packaging systems: Pack 1 showed lower impacts in several categories, Pack 2 displayed an intermediate environmental profile, whereas Pack 3 reduced dependence on fossil resources but exhibited higher land- and water-use impacts together with limitations related to end-of-life management. Conclusion: Packaging materials significantly affected the preservation of phenolic compounds and antioxidant activity in fresh-cut apples while exhibiting distinct environmental profiles. The results demonstrate that no packaging system simultaneously maximized product quality and environmental sustainability, highlighting the importance of integrating analytical performance with life-cycle assessment when developing innovative food packaging solutions.