DOI: 10.1093/neuped/wuag026.001 ISSN: 2977-4454

ID #18 CHD7-associated CHARGE Syndrome and a spinal schwannoma with a SH3PXD2A::HTRA1 fusion: A case report

Sarah Reel, Somak Roy, Daniel Leino, Jorie Gatts, Scott Raskin

Abstract

Background

CHARGE syndrome is a genetic malformation disorder with a wide range of phenotypes. Most commonly, the syndrome is characterized by colobomas, heart disease, choanal atresia, growth delay, intellectual disabilities, genital anomalies, and ear malformations.[1] It is associated with CHD7 gene mutations.[2]The CHD7 gene is part of the chromodomain helicase deoxyribonucleic acid-binding protein family and helps to regulate chromatin organization, which is key for the development of organ systems.[2] Alterations of the CHD7 gene are not classified as a cancer predisposition syndrome, though changes in the gene are reported to be oncogenic.[3] Despite this, CHARGE syndrome is not commonly associated with tumors or malignancies. Schwannomas are benign peripheral nerve sheath tumors, which have genetic drivers outside of associations with NF2-related schwannomatosis, including CHD7::VGLL3 and SH3PXD2A::HTRA1 fusions.[4-6]

Case

We are reporting on a case of a 19-year-old male with CHARGE syndrome who developed a spinal schwannoma. His presentation was characterized by worsening pain and weakness over 6 months. An MRI identified a 3cm3 mass at the level of thoracic spine vertebrae T10 and T11, which was resected. A SH3PXD2A::HTRA1 fusion was identified, which is a novel finding in the setting of CHD7-mutated CHARGE syndrome. Post-operative surveillance imaging has been stable for 4 years.

Conclusion

VGLL3 is a common rearrangement in hybrid schwannoma-perineuriomas, including fusions of CHD7::VGLL3.[7] The SH3PXD2A::HTRA1 fusion, which acts to promote tumorigenesis and cell proliferation likely via the MEK-ERK pathway, is a relatively recent finding.[5,8] In some preclinical studies, the growth of fusion-positive cells was suppressed by a MEK inhibitor.[5] The hope is that ultimately, the fusion could serve as a therapeutic target. Further research is important to better understand the identified SH3PXD2A::HTRA1 fusion and its implications for schwannomas and CHARGE syndrome, specifically the possible need for routine cancer surveillance and the possibility of targeted treatments.

1. Usman N, Sur M. CHARGE Syndrome. StatPearls. 2025;

2. Sanlaville D, Verloes A. CHARGE syndrome: an update. European Journal of Human Genetics. 2007/04/01 2007;15(4):389-399. doi:10.1038/sj.ejhg.5201778

3. Shuto M, Hirano N, Oguri S, et al. Acute myeloid leukemia associated with CHARGE syndrome. American Journal of Medical Genetics Part A. 2023;191(3):878-881. doi:https://doi.org/10.1002/ajmg.a.63087

4. Flucke UE, Hiemcke-Jiwa LS, Wesseling P. Unraveling schwannomas. Neuro Oncol. Dec 8 2023;25(12):2237-2238. doi:10.1093/neuonc/noad171

5. Agnihotri S, Jalali S, Wilson MR, et al. The genomic landscape of schwannoma. Nature Genetics. 2016/11/01 2016;48(11):1339-1348. doi:10.1038/ng.3688

6. Special Issue: Abstracts of the 20th International Congress of Neuropathology, Berlin, Germany, September 13–16, 2023. Brain Pathology. 2023;33(S1):e13194. doi:https://doi.org/10.1111/bpa.13194

7. Dickson BC, Antonescu CR, Demicco EG, et al. Hybrid schwannoma-perineurioma frequently harbors VGLL3 rearrangement. Mod Pathol. Jun 2021;34(6):1116-1124. doi:10.1038/s41379-021-00783-0

8. Lee J-C, Lee P-H, Li S-C, et al. Systematic Characterization of the Clinical and Pathological Features of Schwannomas Harboring SH3PXD2A::HTRA1 Fusion. Modern Pathology. 2024/03/01/ 2024;37(3):100427. doi:https://doi.org/10.1016/j.modpat.2024.100427

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